Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm15570-201ENSMUST00000122093 625 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm18733-202ENSMUST00000174447 401 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm7928-201ENSMUST00000181249 701 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm21631-201ENSMUST00000195041 754 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm5191-201ENSMUST00000222882 1236 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lysmd1Q9D0E3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 AU015228-201ENSMUST00000121103 1320 ntBASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Snord23-201ENSMUST00000116828 109 ntBASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Gm27316-201ENSMUST00000184884 277 ntBASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 AL844586.1-201ENSMUST00000224297 1042 ntBASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lysmd1Q9D0E3 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lysmd1Q9D0E3 Gm15476-201ENSMUST00000118247 1191 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms