Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snf8Q9CZ28 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm25214-201ENSMUST00000104573 129 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm12957-201ENSMUST00000117835 377 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm807-202ENSMUST00000224929 408 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.1□□□□□ -0.47
Snf8Q9CZ28 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snf8Q9CZ28 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm12742-201ENSMUST00000117326 410 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm19309-201ENSMUST00000218295 205 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms