Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm11591-201ENSMUST00000120063 702 ntBASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm16177-201ENSMUST00000120728 718 ntBASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm1335-201ENSMUST00000121653 386 ntBASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gm42693-201ENSMUST00000196779 631 ntBASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim13Q9CYB0 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gm27023-201ENSMUST00000182372 285 ntBASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim13Q9CYB0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms