Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smurf1Q9CUN6 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm24830-201ENSMUST00000102024 166 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm13226-201ENSMUST00000117838 404 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm43002-201ENSMUST00000200310 155 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm26232-201ENSMUST00000083360 166 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smurf1Q9CUN6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm12363-201ENSMUST00000122250 668 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm29127-201ENSMUST00000188304 517 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm44958-201ENSMUST00000203734 736 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.71□□□□□ -0.69
Smurf1Q9CUN6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms