Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 AC132433.1-201ENSMUST00000221553 1101 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm1821-202ENSMUST00000227415 750 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm10288-201ENSMUST00000084614 537 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm12165-201ENSMUST00000117047 342 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm13611-201ENSMUST00000118269 318 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm13461-201ENSMUST00000120980 662 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm10051-201ENSMUST00000145209 414 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm43378-201ENSMUST00000199336 582 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Otud1Q9CUB6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms