Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm25214-201ENSMUST00000104573 129 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm14726-201ENSMUST00000120623 896 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Mir3102-201ENSMUST00000175555 104 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm43743-201ENSMUST00000197898 697 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm7684-201ENSMUST00000211891 829 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm5950-201ENSMUST00000213337 772 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 AC154585.1-201ENSMUST00000218917 997 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.78■□□□□ 0.12
Rtn4Q99P72 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn4Q99P72 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm12731-201ENSMUST00000120932 268 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm36974-201ENSMUST00000194200 1071 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm38092-201ENSMUST00000195600 653 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm43811-201ENSMUST00000202862 695 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm43905-201ENSMUST00000204516 204 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 AC127302.1-201ENSMUST00000215973 1111 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 AV026068-225ENSMUST00000225042 490 ntBASIC15.77■□□□□ 0.12
Rtn4Q99P72 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rtn4Q99P72 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.77■□□□□ 0.11
Rtn4Q99P72 Cog3-203ENSMUST00000227473 4197 ntBASIC15.77■□□□□ 0.11
Rtn4Q99P72 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.77■□□□□ 0.11
Rtn4Q99P72 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn4Q99P72 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.77■□□□□ 0.11
Rtn4Q99P72 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4Q99P72 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4Q99P72 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn4Q99P72 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms