Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col25a1Q99MQ5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col25a1Q99MQ5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col25a1Q99MQ5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col25a1Q99MQ5 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col25a1Q99MQ5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Gm25394-201ENSMUST00000157338 133 ntBASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Mir7088-201ENSMUST00000184227 86 ntBASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col25a1Q99MQ5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm9095-201ENSMUST00000117607 881 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm11500-201ENSMUST00000118237 601 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm14921-201ENSMUST00000118643 908 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm9097-201ENSMUST00000120514 880 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 AA623943-201ENSMUST00000121794 354 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Mir8093-201ENSMUST00000185043 137 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm6606-201ENSMUST00000193613 947 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm2448-201ENSMUST00000207080 559 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm9797-202ENSMUST00000218003 294 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 AC129017.2-201ENSMUST00000226118 1284 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col25a1Q99MQ5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms