Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm3726-201ENSMUST00000203110 785 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm5451-201ENSMUST00000080545 579 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-1Q99MA9 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm15610-201ENSMUST00000120584 195 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm10169-201ENSMUST00000121822 348 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm8723-201ENSMUST00000166076 820 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm8701-201ENSMUST00000169259 874 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm18201-201ENSMUST00000174735 875 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm38151-201ENSMUST00000195085 289 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm18514-201ENSMUST00000218980 436 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Olfr584-201ENSMUST00000098210 964 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-1Q99MA9 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms