Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Gm25830-201ENSMUST00000158923 132 ntBASIC14.51□□□□□ -0.09
RtcbQ99LF4 Gm16030-201ENSMUST00000159098 603 ntBASIC14.51□□□□□ -0.09
RtcbQ99LF4 Gm20414-201ENSMUST00000172918 646 ntBASIC14.51□□□□□ -0.09
RtcbQ99LF4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm12663-201ENSMUST00000118481 958 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Mir1905-201ENSMUST00000122779 82 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm25604-201ENSMUST00000158359 133 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm24809-201ENSMUST00000175318 271 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm18801-201ENSMUST00000186616 536 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm19891-201ENSMUST00000189771 303 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.5□□□□□ -0.09
RtcbQ99LF4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.5□□□□□ -0.09
RtcbQ99LF4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.49□□□□□ -0.09
RtcbQ99LF4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm15620-201ENSMUST00000122949 270 ntBASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm42433-201ENSMUST00000196806 940 ntBASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm6855-201ENSMUST00000206307 790 ntBASIC14.49□□□□□ -0.09
RtcbQ99LF4 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm40879-201ENSMUST00000220759 612 ntBASIC14.49□□□□□ -0.09
RtcbQ99LF4 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.49□□□□□ -0.09
RtcbQ99LF4 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.49□□□□□ -0.09
RtcbQ99LF4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms