Protein–RNA interactions for Protein: Q99L02

Pagr1a, PAXIP1-associated glutamate-rich protein 1A, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pagr1aQ99L02 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pagr1aQ99L02 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pagr1aQ99L02 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pagr1aQ99L02 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pagr1aQ99L02 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pagr1aQ99L02 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pagr1aQ99L02 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gm9089-201ENSMUST00000122027 526 ntBASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gm23218-201ENSMUST00000158124 276 ntBASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pagr1aQ99L02 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm23272-201ENSMUST00000104053 129 ntBASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm23680-201ENSMUST00000083162 164 ntBASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm23105-201ENSMUST00000083719 134 ntBASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pagr1aQ99L02 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm14219-201ENSMUST00000120414 288 ntBASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Mir6407-201ENSMUST00000184510 101 ntBASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm9136-201ENSMUST00000193368 454 ntBASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.62□□□□□ -0.23
Pagr1aQ99L02 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms