Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cdk9Q99J95 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm1335-201ENSMUST00000121653 386 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm37424-201ENSMUST00000191727 561 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm9899-201ENSMUST00000065519 555 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm10268-201ENSMUST00000085340 555 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.86□□□□□ -0.51
Cdk9Q99J95 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk9Q99J95 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.85□□□□□ -0.51
Cdk9Q99J95 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.85□□□□□ -0.51
Cdk9Q99J95 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Gm26927-201ENSMUST00000182385 965 ntBASIC11.85□□□□□ -0.51
Cdk9Q99J95 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Gm43630-201ENSMUST00000201550 776 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms