Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm14724-201ENSMUST00000118400 537 ntBASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm28686-201ENSMUST00000187404 609 ntBASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm8385-201ENSMUST00000058999 643 ntBASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Rps4l-202ENSMUST00000204242 789 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm6867-201ENSMUST00000219165 425 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb6Q91XZ4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm11663-201ENSMUST00000117888 290 ntBASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm12196-201ENSMUST00000120954 262 ntBASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm14017-201ENSMUST00000121934 386 ntBASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhb6Q91XZ4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms