Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Btrc-209ENSMUST00000224478 2194 ntBASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Pcdhga3Q91XY5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm24255-201ENSMUST00000104481 128 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm20482-202ENSMUST00000174729 825 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm43758-201ENSMUST00000199500 367 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdhga3Q91XY5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm14247-201ENSMUST00000120950 237 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm6963-201ENSMUST00000147879 379 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms