Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm807-202ENSMUST00000224929 408 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Ntng1-201ENSMUST00000051253 327 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm7851-201ENSMUST00000117574 323 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm13408-201ENSMUST00000119822 798 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm12164-201ENSMUST00000121695 551 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm13935-201ENSMUST00000121859 798 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm9550-201ENSMUST00000161130 862 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm8343-201ENSMUST00000182705 994 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm27530-201ENSMUST00000184096 98 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm4157-201ENSMUST00000211647 679 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Gm37580-201ENSMUST00000192408 2800 ntBASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx41Q91VN6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm11509-201ENSMUST00000117358 325 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12616-201ENSMUST00000118594 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12624-201ENSMUST00000177615 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12621-201ENSMUST00000177760 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12615-201ENSMUST00000177970 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12622-201ENSMUST00000177975 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm9630-201ENSMUST00000178304 885 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12627-201ENSMUST00000178412 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12625-201ENSMUST00000179122 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12614-201ENSMUST00000179586 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm12613-201ENSMUST00000180323 382 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Gm29787-201ENSMUST00000222129 849 ntBASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx41Q91VN6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms