Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
H1fooQ8VIK3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm6114-201ENSMUST00000182472 968 ntBASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm8956-201ENSMUST00000203939 825 ntBASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm5455-201ENSMUST00000058710 715 ntBASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
H1fooQ8VIK3 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm11511-201ENSMUST00000118146 540 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm14723-201ENSMUST00000118686 215 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm11700-201ENSMUST00000119409 403 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm20482-202ENSMUST00000174729 825 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm43758-201ENSMUST00000199500 367 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm19287-201ENSMUST00000203190 358 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm43962-201ENSMUST00000203898 190 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.86□□□□□ -0.83
H1fooQ8VIK3 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.86□□□□□ -0.83
H1fooQ8VIK3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms