Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup85Q8R480 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm27552-201ENSMUST00000183351 62 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm27844-201ENSMUST00000183613 62 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm43378-201ENSMUST00000199336 582 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.14□□□□□ -0.47
Nup85Q8R480 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup85Q8R480 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup85Q8R480 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm12380-201ENSMUST00000119012 544 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm28071-201ENSMUST00000190355 478 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm18893-201ENSMUST00000198416 943 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.13□□□□□ -0.47
Nup85Q8R480 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup85Q8R480 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nup85Q8R480 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nup85Q8R480 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.12□□□□□ -0.47
Nup85Q8R480 Gm23949-201ENSMUST00000104027 127 ntBASIC12.12□□□□□ -0.47
Nup85Q8R480 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.12□□□□□ -0.47
Nup85Q8R480 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup85Q8R480 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup85Q8R480 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nup85Q8R480 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.12□□□□□ -0.47
Nup85Q8R480 Gm37986-201ENSMUST00000193285 383 ntBASIC12.12□□□□□ -0.47
Nup85Q8R480 Gm43962-201ENSMUST00000203898 190 ntBASIC12.12□□□□□ -0.47
Nup85Q8R480 Gm4607-201ENSMUST00000206649 577 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms