Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm13355-201ENSMUST00000117996 317 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm14660-201ENSMUST00000119809 575 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm13207-201ENSMUST00000119862 773 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm11431-201ENSMUST00000155046 428 ntTSL 3 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm6266-201ENSMUST00000203844 806 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm18329-201ENSMUST00000215832 589 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 AC107711.6-201ENSMUST00000228455 1088 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 AC154838.1-201ENSMUST00000228944 911 ntBASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacnb1Q8R3Z5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Olfr1283-203ENSMUST00000216637 1689 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm15854-201ENSMUST00000118879 808 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm16479-201ENSMUST00000121706 932 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm11300-201ENSMUST00000137651 565 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm22842-201ENSMUST00000157709 118 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm37497-201ENSMUST00000195830 798 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm43743-201ENSMUST00000197898 697 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm18690-201ENSMUST00000204488 985 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm18041-201ENSMUST00000218210 618 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 CT030238.4-201ENSMUST00000228579 801 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Gm24254-201ENSMUST00000083702 104 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacnb1Q8R3Z5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms