Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm8343-201ENSMUST00000182705 994 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm9192-201ENSMUST00000183221 985 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Rps4l-202ENSMUST00000204242 789 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm45433-201ENSMUST00000209386 247 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim29Q8R2Q0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm15236-201ENSMUST00000117309 379 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Mir7677-201ENSMUST00000184226 67 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm28071-201ENSMUST00000190355 478 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm44262-201ENSMUST00000204969 372 ntBASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim29Q8R2Q0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms