Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm11439-201ENSMUST00000118598 409 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm12380-201ENSMUST00000119012 544 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm14208-201ENSMUST00000119645 678 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm12997-201ENSMUST00000120207 640 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm16570-201ENSMUST00000161951 436 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm18038-201ENSMUST00000197900 485 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Gm270-201ENSMUST00000223010 976 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rfwd3Q8CIK8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm24990-201ENSMUST00000157406 323 ntBASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm4157-201ENSMUST00000211647 679 ntBASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms