Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Gm20426-201ENSMUST00000173657 440 ntBASIC12.07□□□□□ -0.48
CopaQ8CIE6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Gm43378-201ENSMUST00000199336 582 ntBASIC12.07□□□□□ -0.48
CopaQ8CIE6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gm18734-201ENSMUST00000172937 808 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gm43947-201ENSMUST00000203019 959 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gm7848-201ENSMUST00000210739 718 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.06□□□□□ -0.48
CopaQ8CIE6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CopaQ8CIE6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.05□□□□□ -0.48
CopaQ8CIE6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.05□□□□□ -0.48
CopaQ8CIE6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.05□□□□□ -0.48
CopaQ8CIE6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.05□□□□□ -0.48
CopaQ8CIE6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.05□□□□□ -0.48
CopaQ8CIE6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CopaQ8CIE6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.05□□□□□ -0.48
CopaQ8CIE6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopaQ8CIE6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopaQ8CIE6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms