Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Csnka2ipQ8CH19 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Csnka2ipQ8CH19 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Csnka2ipQ8CH19 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Csnka2ipQ8CH19 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm5705-201ENSMUST00000066241 711 ntBASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.17□□□□□ -0.62
Csnka2ipQ8CH19 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm15004-201ENSMUST00000119192 630 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm8199-201ENSMUST00000121323 823 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm10051-201ENSMUST00000145209 414 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm22334-201ENSMUST00000158070 133 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Mir1943-201ENSMUST00000158276 73 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm5523-201ENSMUST00000180415 997 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm4482-201ENSMUST00000200876 742 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm1821-202ENSMUST00000227415 750 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Ntng1-201ENSMUST00000051253 327 ntBASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Csnka2ipQ8CH19 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms