Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Lect2-202ENSMUST00000225183 823 ntBASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc28aQ8CEI3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm5370-201ENSMUST00000187187 574 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Gm10254-201ENSMUST00000052888 867 ntBASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc28aQ8CEI3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc28aQ8CEI3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc28aQ8CEI3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc28aQ8CEI3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc28aQ8CEI3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc28aQ8CEI3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc28aQ8CEI3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms