Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm22323-201ENSMUST00000103832 109 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm23270-201ENSMUST00000104055 131 ntBASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm25668-201ENSMUST00000157700 129 ntBASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm17376-201ENSMUST00000166016 84 ntBASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Mir3547-201ENSMUST00000175461 88 ntBASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm6082-201ENSMUST00000215204 454 ntBASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc87Q8CDL9 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms