Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp47Q8BY87 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp47Q8BY87 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp47Q8BY87 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp47Q8BY87 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Cog3-203ENSMUST00000227473 4197 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm15549-201ENSMUST00000121595 622 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm6548-201ENSMUST00000167498 1165 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm8365-201ENSMUST00000197334 648 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm44545-201ENSMUST00000208262 746 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC16.54■□□□□ 0.24
Usp47Q8BY87 AC122350.1-201ENSMUST00000228135 533 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm23105-201ENSMUST00000083719 134 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Gm44806-201ENSMUST00000205574 2303 ntBASIC16.54■□□□□ 0.24
Usp47Q8BY87 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp47Q8BY87 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC16.53■□□□□ 0.24
Usp47Q8BY87 Mir7076-201ENSMUST00000183519 74 ntBASIC16.53■□□□□ 0.24
Usp47Q8BY87 Gm44421-201ENSMUST00000205064 1221 ntBASIC16.53■□□□□ 0.24
Usp47Q8BY87 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 AC154639.1-201ENSMUST00000224393 2849 ntBASIC16.53■□□□□ 0.24
Usp47Q8BY87 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 AC124397.2-201ENSMUST00000225575 2215 ntBASIC16.53■□□□□ 0.24
Usp47Q8BY87 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp47Q8BY87 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC16.52■□□□□ 0.24
Usp47Q8BY87 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm27910-201ENSMUST00000185004 107 ntBASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm37905-201ENSMUST00000195310 341 ntBASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm9645-201ENSMUST00000197131 792 ntBASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm5996-201ENSMUST00000211110 718 ntBASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm6722-201ENSMUST00000221586 390 ntBASIC16.52■□□□□ 0.24
Usp47Q8BY87 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm43174-201ENSMUST00000195914 2445 ntBASIC16.52■□□□□ 0.24
Usp47Q8BY87 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp47Q8BY87 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp47Q8BY87 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp47Q8BY87 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Usp47Q8BY87 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
Usp47Q8BY87 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms