Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm15711-201ENSMUST00000118889 535 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm12380-201ENSMUST00000119012 544 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm11660-201ENSMUST00000120955 412 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Gm270-201ENSMUST00000223010 976 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sfr1Q8BP27 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm12266-201ENSMUST00000120311 962 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm27341-201ENSMUST00000183570 106 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm5705-201ENSMUST00000066241 711 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.06□□□□□ -0.48
Sfr1Q8BP27 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms