Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Mir7677-201ENSMUST00000184226 67 ntBASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Mir6927-201ENSMUST00000184494 71 ntBASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.23□□□□□ -0.77
Srrm4Q8BKA3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Rps4l-202ENSMUST00000204242 789 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm17931-201ENSMUST00000208132 634 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm4157-201ENSMUST00000211647 679 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm19208-201ENSMUST00000213861 912 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm26448-201ENSMUST00000082446 203 ntBASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Srrm4Q8BKA3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Mir7070-201ENSMUST00000183657 86 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms