Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2bQ8BJF9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Gm11793-201ENSMUST00000120433 981 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Gm9823-201ENSMUST00000051212 327 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 BC043934-202ENSMUST00000185694 2356 ntBASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2bQ8BJF9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Gm18893-201ENSMUST00000198416 943 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Gm6013-201ENSMUST00000212264 699 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms