Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm17391-201ENSMUST00000171036 126 ntBASIC11.32□□□□□ -0.6
SynbQ8BI41 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
SynbQ8BI41 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.32□□□□□ -0.6
SynbQ8BI41 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.32□□□□□ -0.6
SynbQ8BI41 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynbQ8BI41 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SynbQ8BI41 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm12029-201ENSMUST00000120073 832 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm8566-201ENSMUST00000120174 465 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm43184-201ENSMUST00000197247 542 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm43058-201ENSMUST00000197645 625 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm6905-201ENSMUST00000205729 511 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm45550-201ENSMUST00000209380 946 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SynbQ8BI41 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.31□□□□□ -0.6
SynbQ8BI41 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.31□□□□□ -0.6
SynbQ8BI41 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynbQ8BI41 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms