Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx55Q6ZPL9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm12943-201ENSMUST00000119616 210 ntBASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm5700-201ENSMUST00000191483 989 ntBASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx55Q6ZPL9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm15374-201ENSMUST00000119313 844 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm20495-201ENSMUST00000173902 235 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm44124-201ENSMUST00000204159 472 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx55Q6ZPL9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms