Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rad54bQ6PFE3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm14109-201ENSMUST00000118814 309 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm31256-201ENSMUST00000194705 506 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm21769-201ENSMUST00000211922 111 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm2553-201ENSMUST00000215986 605 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm5705-201ENSMUST00000066241 711 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rad54bQ6PFE3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.83□□□□□ -0.51
Rad54bQ6PFE3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rad54bQ6PFE3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Gm18935-201ENSMUST00000212692 664 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rad54bQ6PFE3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms