Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.54□□□□□ -0.4
CtifQ6PEE2 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CtifQ6PEE2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CtifQ6PEE2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CtifQ6PEE2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CtifQ6PEE2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm12091-201ENSMUST00000146791 830 ntBASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm38241-201ENSMUST00000192641 898 ntBASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CtifQ6PEE2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CtifQ6PEE2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Gm12138-201ENSMUST00000122180 951 ntBASIC12.52□□□□□ -0.41
CtifQ6PEE2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.52□□□□□ -0.41
CtifQ6PEE2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.52□□□□□ -0.41
CtifQ6PEE2 Gm20445-201ENSMUST00000061905 565 ntBASIC12.52□□□□□ -0.41
CtifQ6PEE2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CtifQ6PEE2 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.52□□□□□ -0.41
CtifQ6PEE2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
CtifQ6PEE2 Gm15321-201ENSMUST00000121290 288 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms