Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm11578-201ENSMUST00000118530 459 ntBASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm13422-201ENSMUST00000118834 504 ntBASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm15620-201ENSMUST00000122949 270 ntBASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm42430-201ENSMUST00000197209 616 ntBASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd4Q6PDQ2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Gm42913-201ENSMUST00000197936 1853 ntBASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chd4Q6PDQ2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.08■□□□□ 0
Chd4Q6PDQ2 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm25951-201ENSMUST00000175330 64 ntBASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.08■□□□□ 0
Chd4Q6PDQ2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.08■□□□□ 0
Chd4Q6PDQ2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd4Q6PDQ2 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm11560-201ENSMUST00000117567 948 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm19927-201ENSMUST00000185792 781 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC15.07■□□□□ 0
Chd4Q6PDQ2 AC154361.2-201ENSMUST00000224747 943 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm9544-201ENSMUST00000223349 2482 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms