Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Gm43184-201ENSMUST00000197247 542 ntBASIC12.58□□□□□ -0.4
Scube3Q66PY1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 AC134439.1-201ENSMUST00000220923 600 ntBASIC12.58□□□□□ -0.4
Scube3Q66PY1 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.58□□□□□ -0.4
Scube3Q66PY1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Gm5705-201ENSMUST00000066241 711 ntBASIC12.58□□□□□ -0.4
Scube3Q66PY1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scube3Q66PY1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.58□□□□□ -0.4
Scube3Q66PY1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scube3Q66PY1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 AC122539.3-201ENSMUST00000218355 1431 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm8089-201ENSMUST00000122463 968 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Mir6927-201ENSMUST00000184494 71 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm37973-201ENSMUST00000195767 1289 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm42696-201ENSMUST00000199859 1142 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 AC116589.4-201ENSMUST00000222390 216 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.57□□□□□ -0.4
Scube3Q66PY1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scube3Q66PY1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm20541-201ENSMUST00000173035 1406 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms