Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ift88Q61371 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ift88Q61371 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.98□□□□□ -0.33
Ift88Q61371 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ift88Q61371 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ift88Q61371 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Ift88Q61371 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Ift88Q61371 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.98□□□□□ -0.33
Ift88Q61371 Gm8956-201ENSMUST00000203939 825 ntBASIC12.98□□□□□ -0.33
Ift88Q61371 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.98□□□□□ -0.33
Ift88Q61371 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.98□□□□□ -0.33
Ift88Q61371 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.98□□□□□ -0.33
Ift88Q61371 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.98□□□□□ -0.33
Ift88Q61371 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ift88Q61371 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ift88Q61371 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.97□□□□□ -0.33
Ift88Q61371 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Gm11511-201ENSMUST00000118146 540 ntBASIC12.97□□□□□ -0.33
Ift88Q61371 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.97□□□□□ -0.33
Ift88Q61371 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.97□□□□□ -0.33
Ift88Q61371 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.97□□□□□ -0.33
Ift88Q61371 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.97□□□□□ -0.33
Ift88Q61371 Gm5070-201ENSMUST00000177599 862 ntBASIC12.97□□□□□ -0.33
Ift88Q61371 Gm3096-201ENSMUST00000185770 364 ntBASIC12.97□□□□□ -0.33
Ift88Q61371 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ift88Q61371 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.97□□□□□ -0.33
Ift88Q61371 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ift88Q61371 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ift88Q61371 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.97□□□□□ -0.33
Ift88Q61371 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ift88Q61371 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ift88Q61371 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ift88Q61371 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.96□□□□□ -0.33
Ift88Q61371 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms