Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm11700-201ENSMUST00000119409 403 ntBASIC11.23□□□□□ -0.61
Nr1h4Q60641 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm25043-201ENSMUST00000158604 212 ntBASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm2546-201ENSMUST00000182630 991 ntBASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm7653-201ENSMUST00000214567 508 ntBASIC11.23□□□□□ -0.61
Nr1h4Q60641 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.23□□□□□ -0.61
Nr1h4Q60641 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nr1h4Q60641 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm14832-201ENSMUST00000121289 322 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm27731-201ENSMUST00000185192 107 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm43002-201ENSMUST00000200310 155 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.22□□□□□ -0.61
Nr1h4Q60641 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nr1h4Q60641 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nr1h4Q60641 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms