Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Xrcc1Q60596 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Xrcc1Q60596 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Xrcc1Q60596 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Xrcc1Q60596 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Xrcc1Q60596 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Xrcc1Q60596 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.27□□□□□ -0.6
Xrcc1Q60596 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm14058-201ENSMUST00000116082 735 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm23085-201ENSMUST00000157849 293 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm6114-201ENSMUST00000182472 968 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm6450-201ENSMUST00000200896 574 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm10288-201ENSMUST00000084614 537 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.27□□□□□ -0.61
Xrcc1Q60596 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Xrcc1Q60596 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gm24891-201ENSMUST00000104391 136 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gm7851-201ENSMUST00000117574 323 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gm15207-201ENSMUST00000119259 442 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gm12566-201ENSMUST00000121479 359 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 B9d1os-201ENSMUST00000137010 674 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gm18827-201ENSMUST00000188341 790 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Gm38117-201ENSMUST00000194653 939 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.26□□□□□ -0.61
Xrcc1Q60596 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Xrcc1Q60596 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms