Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gm8343-201ENSMUST00000182705 994 ntBASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gm43184-201ENSMUST00000197247 542 ntBASIC12.23□□□□□ -0.45
Trim38Q5SZ99 AY036118-201ENSMUST00000200021 923 ntBASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gm4157-201ENSMUST00000211647 679 ntBASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm13350-201ENSMUST00000120519 479 ntBASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim38Q5SZ99 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm29615-201ENSMUST00000185371 697 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms