Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Mir1190-201ENSMUST00000116925 96 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm44917-201ENSMUST00000208798 520 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm22495-201ENSMUST00000104492 126 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm25580-201ENSMUST00000083409 327 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm5808-201ENSMUST00000178090 357 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm44540-201ENSMUST00000205640 354 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Gm29689-201ENSMUST00000221076 589 ntBASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps13aQ5H8C4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm14071-201ENSMUST00000117817 509 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm16228-201ENSMUST00000162286 809 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Mir7051-201ENSMUST00000184167 73 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm18621-201ENSMUST00000222677 679 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms