Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Gm2594-201ENSMUST00000214774 742 ntBASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf20Q5DTM8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf20Q5DTM8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Mir7677-201ENSMUST00000184226 67 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm28071-201ENSMUST00000190355 478 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm38314-201ENSMUST00000195709 625 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm18038-201ENSMUST00000197900 485 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Rps4l-202ENSMUST00000204242 789 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm44262-201ENSMUST00000204969 372 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf20Q5DTM8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Gm270-201ENSMUST00000223010 976 ntBASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Gm26448-201ENSMUST00000082446 203 ntBASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf20Q5DTM8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms