Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 AC131117.1-201ENSMUST00000225154 1171 ntBASIC11.69□□□□□ -0.54
Atf4Q06507 AC116724.1-201ENSMUST00000227900 972 ntBASIC11.69□□□□□ -0.54
Atf4Q06507 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Atf4Q06507 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC11.69□□□□□ -0.54
Atf4Q06507 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.69□□□□□ -0.54
Atf4Q06507 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.69□□□□□ -0.54
Atf4Q06507 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atf4Q06507 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Atf4Q06507 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Atf4Q06507 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Gm12058-201ENSMUST00000118614 437 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Gm13341-201ENSMUST00000120780 672 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Gm26595-201ENSMUST00000181585 484 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Gm27039-201ENSMUST00000182438 962 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Gm44585-201ENSMUST00000207150 607 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Gm5904-201ENSMUST00000210286 865 ntBASIC11.68□□□□□ -0.54
Atf4Q06507 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC11.68□□□□□ -0.54
Atf4Q06507 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Atf4Q06507 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Atf4Q06507 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Atf4Q06507 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Atf4Q06507 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atf4Q06507 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.67□□□□□ -0.54
Atf4Q06507 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Vmn1r-ps110-201ENSMUST00000117530 1094 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 Gm16571-201ENSMUST00000159112 291 ntBASIC11.67□□□□□ -0.54
Atf4Q06507 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.67□□□□□ -0.54
Atf4Q06507 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atf4Q06507 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms