Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thbs3Q05895 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Thbs3Q05895 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Thbs3Q05895 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Thbs3Q05895 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Thbs3Q05895 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm12857-201ENSMUST00000117678 592 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm15207-201ENSMUST00000119259 442 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm14208-201ENSMUST00000119645 678 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm12266-201ENSMUST00000120311 962 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Gm4310-201ENSMUST00000177847 889 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Mir433-201ENSMUST00000093564 124 ntBASIC10.35□□□□□ -0.75
Thbs3Q05895 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Thbs3Q05895 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Thbs3Q05895 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm11663-201ENSMUST00000117888 290 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm11439-201ENSMUST00000118598 409 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm12196-201ENSMUST00000120954 262 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Thbs3Q05895 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm26047-201ENSMUST00000157308 113 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm28937-201ENSMUST00000185413 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm29400-201ENSMUST00000187208 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm28662-201ENSMUST00000188446 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm28251-201ENSMUST00000188835 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm37318-201ENSMUST00000194325 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm38017-201ENSMUST00000194768 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm37287-201ENSMUST00000195449 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm37793-201ENSMUST00000195548 695 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm26047-202ENSMUST00000198840 115 ntBASIC10.34□□□□□ -0.75
Thbs3Q05895 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.34□□□□□ -0.75
Thbs3Q05895 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Thbs3Q05895 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms