Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VcpQ01853 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.61□□□□□ -0.39
VcpQ01853 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VcpQ01853 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Gm12628-201ENSMUST00000122193 382 ntBASIC12.61□□□□□ -0.39
VcpQ01853 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.61□□□□□ -0.39
VcpQ01853 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.61□□□□□ -0.39
VcpQ01853 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.61□□□□□ -0.39
VcpQ01853 Gm9132-201ENSMUST00000210182 832 ntBASIC12.61□□□□□ -0.39
VcpQ01853 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.61□□□□□ -0.39
VcpQ01853 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.61□□□□□ -0.39
VcpQ01853 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VcpQ01853 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.61□□□□□ -0.39
VcpQ01853 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VcpQ01853 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VcpQ01853 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VcpQ01853 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Gm14644-201ENSMUST00000116671 647 ntBASIC12.6□□□□□ -0.39
VcpQ01853 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
VcpQ01853 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VcpQ01853 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.6□□□□□ -0.39
VcpQ01853 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.6□□□□□ -0.39
VcpQ01853 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.6□□□□□ -0.39
VcpQ01853 Ginm1-202ENSMUST00000065124 300 ntBASIC12.6□□□□□ -0.39
VcpQ01853 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VcpQ01853 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.6□□□□□ -0.39
VcpQ01853 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.6□□□□□ -0.39
VcpQ01853 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VcpQ01853 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
VcpQ01853 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VcpQ01853 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VcpQ01853 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
VcpQ01853 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Gm12501-201ENSMUST00000119163 529 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
VcpQ01853 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.59□□□□□ -0.39
VcpQ01853 Gm20392-201ENSMUST00000173047 701 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.59□□□□□ -0.39
VcpQ01853 Gm3793-201ENSMUST00000204973 672 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Gm45398-201ENSMUST00000210561 165 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms