Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx3-2P97503 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm23251-201ENSMUST00000103773 110 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm11509-201ENSMUST00000117358 325 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm9550-201ENSMUST00000161130 862 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Mir3547-201ENSMUST00000175461 88 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm5733-201ENSMUST00000190232 939 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gm6905-201ENSMUST00000205729 511 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.17□□□□□ -0.62
Nkx3-2P97503 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx3-2P97503 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12616-201ENSMUST00000118594 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12624-201ENSMUST00000177615 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12621-201ENSMUST00000177760 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12615-201ENSMUST00000177970 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12622-201ENSMUST00000177975 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12627-201ENSMUST00000178412 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12625-201ENSMUST00000179122 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12614-201ENSMUST00000179586 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm12613-201ENSMUST00000180323 382 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm5706-201ENSMUST00000181525 993 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm19353-201ENSMUST00000184561 445 ntBASIC11.16□□□□□ -0.62
Nkx3-2P97503 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx3-2P97503 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms