Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm12247-201ENSMUST00000117585 670 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm12943-201ENSMUST00000119616 210 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm6390-201ENSMUST00000215034 589 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.73□□□□□ -0.05
Smarcc1P97496 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Map1b-203ENSMUST00000223725 2669 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.73□□□□□ -0.05
Smarcc1P97496 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcc1P97496 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smarcc1P97496 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm5982-201ENSMUST00000196234 512 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm43912-201ENSMUST00000204352 538 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm39288-201ENSMUST00000210554 446 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.72□□□□□ -0.05
Smarcc1P97496 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Gm4978-201ENSMUST00000071565 801 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcc1P97496 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.72□□□□□ -0.05
Smarcc1P97496 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smarcc1P97496 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Smarcc1P97496 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Gm25053-201ENSMUST00000103982 133 ntBASIC14.71□□□□□ -0.05
Smarcc1P97496 Gm25922-201ENSMUST00000104281 130 ntBASIC14.71□□□□□ -0.05
Smarcc1P97496 Gm13422-201ENSMUST00000118834 504 ntBASIC14.71□□□□□ -0.05
Smarcc1P97496 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcc1P97496 Gm24679-201ENSMUST00000158762 111 ntBASIC14.71□□□□□ -0.05
Smarcc1P97496 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Smarcc1P97496 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.71□□□□□ -0.05
Smarcc1P97496 Gm28833-201ENSMUST00000189671 559 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms