Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Smad1P70340 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Smad1P70340 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.16□□□□□ -0.46
Smad1P70340 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smad1P70340 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.15□□□□□ -0.46
Smad1P70340 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.15□□□□□ -0.46
Smad1P70340 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smad1P70340 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smad1P70340 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.15□□□□□ -0.46
Smad1P70340 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smad1P70340 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.15□□□□□ -0.46
Smad1P70340 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.15□□□□□ -0.46
Smad1P70340 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.15□□□□□ -0.46
Smad1P70340 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smad1P70340 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smad1P70340 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smad1P70340 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smad1P70340 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.15□□□□□ -0.46
Smad1P70340 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smad1P70340 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smad1P70340 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smad1P70340 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Smad1P70340 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smad1P70340 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smad1P70340 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Smad1P70340 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smad1P70340 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Gm11628-201ENSMUST00000117568 171 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Gm13611-201ENSMUST00000118269 318 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.14□□□□□ -0.47
Smad1P70340 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.14□□□□□ -0.47
Smad1P70340 Gm9211-201ENSMUST00000182882 975 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Gm27552-201ENSMUST00000183351 62 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Gm27844-201ENSMUST00000183613 62 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.14□□□□□ -0.47
Smad1P70340 Gm8913-201ENSMUST00000209491 641 ntBASIC12.14□□□□□ -0.47
Smad1P70340 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smad1P70340 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smad1P70340 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smad1P70340 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms