Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13□□□□□ -0.33
Hmgb1P63158 Gm4607-201ENSMUST00000206649 577 ntBASIC13□□□□□ -0.33
Hmgb1P63158 Gm45598-202ENSMUST00000210719 986 ntBASIC13□□□□□ -0.33
Hmgb1P63158 AC153961.1-201ENSMUST00000217760 385 ntBASIC13□□□□□ -0.33
Hmgb1P63158 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hmgb1P63158 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13□□□□□ -0.33
Hmgb1P63158 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgb1P63158 Gm18986-201ENSMUST00000216029 1986 ntBASIC13□□□□□ -0.33
Hmgb1P63158 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.99□□□□□ -0.33
Hmgb1P63158 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.99□□□□□ -0.33
Hmgb1P63158 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm8885-201ENSMUST00000189382 598 ntBASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.99□□□□□ -0.33
Hmgb1P63158 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Gm7399-201ENSMUST00000032395 858 ntBASIC12.99□□□□□ -0.33
Hmgb1P63158 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hmgb1P63158 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgb1P63158 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.98□□□□□ -0.33
Hmgb1P63158 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm38314-201ENSMUST00000195709 625 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm43002-201ENSMUST00000200310 155 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm5455-201ENSMUST00000058710 715 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm8420-201ENSMUST00000097103 598 ntBASIC12.98□□□□□ -0.33
Hmgb1P63158 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgb1P63158 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgb1P63158 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms