Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.07□□□□□ -0.48
Ybx1P62960 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.07□□□□□ -0.48
Ybx1P62960 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Gm8459-201ENSMUST00000162504 760 ntBASIC12.07□□□□□ -0.48
Ybx1P62960 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Gm6450-201ENSMUST00000200896 574 ntBASIC12.07□□□□□ -0.48
Ybx1P62960 Gm19091-201ENSMUST00000208120 978 ntBASIC12.07□□□□□ -0.48
Ybx1P62960 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ybx1P62960 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.07□□□□□ -0.48
Ybx1P62960 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ybx1P62960 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.07□□□□□ -0.48
Ybx1P62960 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ybx1P62960 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.07□□□□□ -0.48
Ybx1P62960 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.07□□□□□ -0.48
Ybx1P62960 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ybx1P62960 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm25880-201ENSMUST00000104331 132 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ybx1P62960 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ybx1P62960 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm15744-201ENSMUST00000161734 213 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm5100-201ENSMUST00000195631 589 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Gm8574-201ENSMUST00000203207 924 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Gm7940-201ENSMUST00000218195 769 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ybx1P62960 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.06□□□□□ -0.48
Ybx1P62960 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ybx1P62960 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ybx1P62960 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ybx1P62960 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.05□□□□□ -0.48
Ybx1P62960 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ybx1P62960 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ybx1P62960 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.05□□□□□ -0.48
Ybx1P62960 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm12990-201ENSMUST00000120372 468 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm24398-201ENSMUST00000157870 109 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm23218-201ENSMUST00000158124 276 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm28937-201ENSMUST00000185413 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm29400-201ENSMUST00000187208 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm28662-201ENSMUST00000188446 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm28251-201ENSMUST00000188835 695 ntBASIC12.05□□□□□ -0.48
Ybx1P62960 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.05□□□□□ -0.48
Ybx1P62960 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms