Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm15808-201ENSMUST00000119046 604 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm25043-201ENSMUST00000158604 212 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm8018-201ENSMUST00000173536 789 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm31256-201ENSMUST00000194705 506 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.4□□□□□ -0.75
Sec61a1P61620 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sec61a1P61620 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Sec61a1P61620 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sec61a1P61620 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sec61a1P61620 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Sec61a1P61620 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm14726-201ENSMUST00000120623 896 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm18056-201ENSMUST00000207670 568 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm18061-201ENSMUST00000208350 562 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm18063-201ENSMUST00000208529 568 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm18052-201ENSMUST00000208750 559 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm24136-201ENSMUST00000083374 165 ntBASIC10.39□□□□□ -0.75
Sec61a1P61620 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61a1P61620 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a1P61620 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a1P61620 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.38□□□□□ -0.75
Sec61a1P61620 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.38□□□□□ -0.75
Sec61a1P61620 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.38□□□□□ -0.75
Sec61a1P61620 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a1P61620 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms