Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rhbdl3P58873 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm11500-201ENSMUST00000118237 601 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm43163-201ENSMUST00000196571 442 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm19091-201ENSMUST00000208120 978 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm30671-201ENSMUST00000214898 318 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.91□□□□□ -0.18
Rhbdl3P58873 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rhbdl3P58873 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm25063-201ENSMUST00000104666 94 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm12990-201ENSMUST00000120372 468 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm8197-202ENSMUST00000193422 934 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm18561-201ENSMUST00000206027 804 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm9139-201ENSMUST00000218817 700 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm5468-202ENSMUST00000227851 682 ntBASIC13.9□□□□□ -0.18
Rhbdl3P58873 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rhbdl3P58873 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rhbdl3P58873 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
Rhbdl3P58873 Gm14892-201ENSMUST00000117636 267 ntBASIC13.89□□□□□ -0.19
Rhbdl3P58873 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms