Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Gm38266-201ENSMUST00000194931 421 ntBASIC13.26□□□□□ -0.29
Rrp1P56183 Gm18935-201ENSMUST00000212692 664 ntBASIC13.26□□□□□ -0.29
Rrp1P56183 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rrp1P56183 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rrp1P56183 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rrp1P56183 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rrp1P56183 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rrp1P56183 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.25□□□□□ -0.29
Rrp1P56183 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.25□□□□□ -0.29
Rrp1P56183 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.25□□□□□ -0.29
Rrp1P56183 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.25□□□□□ -0.29
Rrp1P56183 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm27516-201ENSMUST00000184237 98 ntBASIC13.25□□□□□ -0.29
Rrp1P56183 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.25□□□□□ -0.29
Rrp1P56183 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.25□□□□□ -0.29
Rrp1P56183 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm10312-201ENSMUST00000078515 489 ntBASIC13.25□□□□□ -0.29
Rrp1P56183 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rrp1P56183 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Rrp1P56183 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rrp1P56183 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.24□□□□□ -0.29
Rrp1P56183 Gm27501-201ENSMUST00000183599 107 ntBASIC13.24□□□□□ -0.29
Rrp1P56183 Gm29396-201ENSMUST00000185659 716 ntBASIC13.24□□□□□ -0.29
Rrp1P56183 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.24□□□□□ -0.29
Rrp1P56183 Gm37489-201ENSMUST00000191883 159 ntBASIC13.24□□□□□ -0.29
Rrp1P56183 Gm8956-201ENSMUST00000203939 825 ntBASIC13.24□□□□□ -0.29
Rrp1P56183 Gm4607-201ENSMUST00000206649 577 ntBASIC13.24□□□□□ -0.29
Rrp1P56183 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.24□□□□□ -0.29
Rrp1P56183 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.24□□□□□ -0.29
Rrp1P56183 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rrp1P56183 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms